Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations
Identifieur interne : 006167 ( Main/Exploration ); précédent : 006166; suivant : 006168Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations
Auteurs : Thierry Rouxel [France] ; Jonathan Grandaubert [France] ; James K. Hane [Australie] ; Claire Hoede [France] ; Angela P. Van De Wouw [Australie] ; Arnaud Couloux [France] ; Victoria Dominguez [France] ; Véronique Anthouard [France] ; Pascal Bally [France] ; Salim Bourras [France] ; Anton J. Cozijnsen [Australie] ; Lynda M. Ciuffetti [États-Unis] ; Alexandre Degrave [France] ; Azita Dilmaghani [France] ; Laurent Duret [France] ; Isabelle Fudal [France] ; Stephen B. Goodwin [États-Unis] ; Lilian Gout [France] ; Nicolas Glaser [France] ; Juliette Linglin [France] ; Gert H. J. Kema [Pays-Bas] ; Nicolas Lapalu [France] ; Christopher B. Lawrence [États-Unis] ; Kim May [Australie] ; Michel Meyer [France] ; Bénédicte Ollivier [France] ; Julie Poulain [France] ; Conrad L. Schoch [États-Unis] ; Adeline Simon [France] ; Joseph W. Spatafora [États-Unis] ; Anna Stachowiak [Pologne] ; B. Gillian Turgeon [États-Unis] ; Brett M. Tyler [États-Unis] ; Delphine Vincent [France] ; Jean Weissenbach [France] ; Joëlle Amselem [France] ; Hadi Quesneville [France] ; Richard P. Oliver [Australie] ; Patrick Wincker [France] ; Marie-Hélène Balesdent [France] ; Barbara J. Howlett [Australie]Source :
- Nature Communications [ 2041-1723 ] ; 2011.
Abstract
Fungi are of primary ecological, biotechnological and economic importance. Many fundamental biological processes that are shared by animals and fungi are studied in fungi due to their experimental tractability. Many fungi are pathogens or mutualists and are model systems to analyse effector genes and their mechanisms of diversification. In this study, we report the genome sequence of the phytopathogenic ascomycete
Url:
DOI: 10.1038/ncomms1189
PubMed: 21326234
PubMed Central: 3105345
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream Pmc, to step Corpus: 000113
- to stream Pmc, to step Curation: 000113
- to stream Pmc, to step Checkpoint: 002334
- to stream Ncbi, to step Merge: 000991
- to stream Ncbi, to step Curation: 000991
- to stream Ncbi, to step Checkpoint: 000991
- to stream Main, to step Merge: 006528
- to stream Main, to step Curation: 006167
Le document en format XML
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J." last="Kema">Gert H. J. Kema</name><affiliation wicri:level="1"><nlm:aff id="a9"><institution>Wageningen UR, Plant Research International, Department of Biointeractions and Plant Health</institution>, P.O. Box 69, Wageningen 6700 AB,<country>The Netherlands</country>.</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Lapalu, Nicolas" sort="Lapalu, Nicolas" uniqKey="Lapalu N" first="Nicolas" last="Lapalu">Nicolas Lapalu</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>INRA-URGI, Route de Saint Cyr</institution>, Versailles Cedex F-78026,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Lawrence, Christopher B" sort="Lawrence, Christopher B" uniqKey="Lawrence C" first="Christopher B." last="Lawrence">Christopher B. 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Schoch</name><affiliation wicri:level="1"><nlm:aff id="a11"><institution>NIH/NLM/NCBI, 45 Center Drive, MSC 6510</institution>, Bethesda, Maryland 20892-6510,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Simon, Adeline" sort="Simon, Adeline" uniqKey="Simon A" first="Adeline" last="Simon">Adeline Simon</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Spatafora, Joseph W" sort="Spatafora, Joseph W" uniqKey="Spatafora J" first="Joseph W." last="Spatafora">Joseph W. Spatafora</name><affiliation wicri:level="1"><nlm:aff id="a6"><institution>Department of Botany and Plant Pathology, Cordley Hall 2082, Oregon State University</institution>, Corvallis, Oregon 97331-2902,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Stachowiak, Anna" sort="Stachowiak, Anna" uniqKey="Stachowiak A" first="Anna" last="Stachowiak">Anna Stachowiak</name><affiliation wicri:level="1"><nlm:aff id="a12"><institution>Institute of Plant Genetics, Polish Academy of Sciences</institution>, Strzeszynska 34, Poznan PL-60479,<country>Poland</country>.</nlm:aff><country xml:lang="fr">Pologne</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Turgeon, B Gillian" sort="Turgeon, B Gillian" uniqKey="Turgeon B" first="B. Gillian" last="Turgeon">B. Gillian Turgeon</name><affiliation wicri:level="1"><nlm:aff id="a13"><institution>Deparment of Plant Pathology & Plant-Microbe Biology, Cornell University</institution>, Ithaca, New York 14853,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Tyler, Brett M" sort="Tyler, Brett M" uniqKey="Tyler B" first="Brett M." last="Tyler">Brett M. 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Oliver</name><affiliation wicri:level="1"><nlm:aff id="a15"><institution>Australian Centre for Necrotrophic Fungal Pathogens, Curtin University</institution>, Perth, Western Australia 6845,<country>Australia</country>.</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Wincker, Patrick" sort="Wincker, Patrick" uniqKey="Wincker P" first="Patrick" last="Wincker">Patrick Wincker</name><affiliation wicri:level="1"><nlm:aff id="a5"><institution>GENOSCOPE, Centre National de Séquençage, Institut de Génomique CEA/DSV, 2, rue Gaston Crémieux, CP 5706</institution>, Evry Cedex F-91057,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Balesdent, Marie Helene" sort="Balesdent, Marie Helene" uniqKey="Balesdent M" first="Marie-Hélène" last="Balesdent">Marie-Hélène Balesdent</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Howlett, Barbara J" sort="Howlett, Barbara J" uniqKey="Howlett B" first="Barbara J." last="Howlett">Barbara J. Howlett</name><affiliation wicri:level="1"><nlm:aff id="a4"><institution>School of Botany, University of Melbourne</institution>, Victoria 3010,<country>Australia</country>.</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PMC</idno><idno type="pmid">21326234</idno><idno type="pmc">3105345</idno><idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3105345</idno><idno type="RBID">PMC:3105345</idno><idno type="doi">10.1038/ncomms1189</idno><date when="2011">2011</date><idno type="wicri:Area/Pmc/Corpus">000113</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000113</idno><idno type="wicri:Area/Pmc/Curation">000113</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000113</idno><idno type="wicri:Area/Pmc/Checkpoint">002334</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">002334</idno><idno type="wicri:Area/Ncbi/Merge">000991</idno><idno type="wicri:Area/Ncbi/Curation">000991</idno><idno type="wicri:Area/Ncbi/Checkpoint">000991</idno><idno type="wicri:Area/Main/Merge">006528</idno><idno type="wicri:Area/Main/Curation">006167</idno><idno type="wicri:Area/Main/Exploration">006167</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main">Effector diversification within compartments of the <italic>Leptosphaeria maculans</italic> genome affected by Repeat-Induced Point mutations</title><author><name sortKey="Rouxel, Thierry" sort="Rouxel, Thierry" uniqKey="Rouxel T" first="Thierry" last="Rouxel">Thierry Rouxel</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Grandaubert, Jonathan" sort="Grandaubert, Jonathan" uniqKey="Grandaubert J" first="Jonathan" last="Grandaubert">Jonathan Grandaubert</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Hane, James K" sort="Hane, James K" uniqKey="Hane J" first="James K." last="Hane">James K. Hane</name><affiliation wicri:level="1"><nlm:aff id="a2"><institution>Murdoch University</institution>, South Street, Murdoch, Western Australia 6150,<country>Australia</country>.</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Hoede, Claire" sort="Hoede, Claire" uniqKey="Hoede C" first="Claire" last="Hoede">Claire Hoede</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>INRA-URGI, Route de Saint Cyr</institution>, Versailles Cedex F-78026,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Van De Wouw, Angela P" sort="Van De Wouw, Angela P" uniqKey="Van De Wouw A" first="Angela P." last="Van De Wouw">Angela P. Van De Wouw</name><affiliation wicri:level="1"><nlm:aff id="a4"><institution>School of Botany, University of Melbourne</institution>, Victoria 3010,<country>Australia</country>.</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Couloux, Arnaud" sort="Couloux, Arnaud" uniqKey="Couloux A" first="Arnaud" last="Couloux">Arnaud Couloux</name><affiliation wicri:level="1"><nlm:aff id="a5"><institution>GENOSCOPE, Centre National de Séquençage, Institut de Génomique CEA/DSV, 2, rue Gaston Crémieux, CP 5706</institution>, Evry Cedex F-91057,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Dominguez, Victoria" sort="Dominguez, Victoria" uniqKey="Dominguez V" first="Victoria" last="Dominguez">Victoria Dominguez</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>INRA-URGI, Route de Saint Cyr</institution>, Versailles Cedex F-78026,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Anthouard, Veronique" sort="Anthouard, Veronique" uniqKey="Anthouard V" first="Véronique" last="Anthouard">Véronique Anthouard</name><affiliation wicri:level="1"><nlm:aff id="a5"><institution>GENOSCOPE, Centre National de Séquençage, Institut de Génomique CEA/DSV, 2, rue Gaston Crémieux, CP 5706</institution>, Evry Cedex F-91057,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Bally, Pascal" sort="Bally, Pascal" uniqKey="Bally P" first="Pascal" last="Bally">Pascal Bally</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Bourras, Salim" sort="Bourras, Salim" uniqKey="Bourras S" first="Salim" last="Bourras">Salim Bourras</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Cozijnsen, Anton J" sort="Cozijnsen, Anton J" uniqKey="Cozijnsen A" first="Anton J." last="Cozijnsen">Anton J. Cozijnsen</name><affiliation wicri:level="1"><nlm:aff id="a4"><institution>School of Botany, University of Melbourne</institution>, Victoria 3010,<country>Australia</country>.</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Ciuffetti, Lynda M" sort="Ciuffetti, Lynda M" uniqKey="Ciuffetti L" first="Lynda M." last="Ciuffetti">Lynda M. Ciuffetti</name><affiliation wicri:level="1"><nlm:aff id="a6"><institution>Department of Botany and Plant Pathology, Cordley Hall 2082, Oregon State University</institution>, Corvallis, Oregon 97331-2902,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Degrave, Alexandre" sort="Degrave, Alexandre" uniqKey="Degrave A" first="Alexandre" last="Degrave">Alexandre Degrave</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Dilmaghani, Azita" sort="Dilmaghani, Azita" uniqKey="Dilmaghani A" first="Azita" last="Dilmaghani">Azita Dilmaghani</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Duret, Laurent" sort="Duret, Laurent" uniqKey="Duret L" first="Laurent" last="Duret">Laurent Duret</name><affiliation wicri:level="1"><nlm:aff id="a7"><institution>Laboratoire Biométrie et Biologie Evolutive, UMR CNRS 5558, Université Lyon 1</institution>, 43 Bld du 11 Novembre 1918, Villeurbanne cedex F-69622,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Fudal, Isabelle" sort="Fudal, Isabelle" uniqKey="Fudal I" first="Isabelle" last="Fudal">Isabelle Fudal</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Goodwin, Stephen B" sort="Goodwin, Stephen B" uniqKey="Goodwin S" first="Stephen B." last="Goodwin">Stephen B. Goodwin</name><affiliation wicri:level="1"><nlm:aff id="a8"><institution>USDA-ARS, Crop Production and Pest Control Research Unit, Purdue University</institution>, 915 West State Street, West Lafayette, Indiana 47907-2054,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Gout, Lilian" sort="Gout, Lilian" uniqKey="Gout L" first="Lilian" last="Gout">Lilian Gout</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Glaser, Nicolas" sort="Glaser, Nicolas" uniqKey="Glaser N" first="Nicolas" last="Glaser">Nicolas Glaser</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Linglin, Juliette" sort="Linglin, Juliette" uniqKey="Linglin J" first="Juliette" last="Linglin">Juliette Linglin</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Kema, Gert H J" sort="Kema, Gert H J" uniqKey="Kema G" first="Gert H. J." last="Kema">Gert H. J. Kema</name><affiliation wicri:level="1"><nlm:aff id="a9"><institution>Wageningen UR, Plant Research International, Department of Biointeractions and Plant Health</institution>, P.O. Box 69, Wageningen 6700 AB,<country>The Netherlands</country>.</nlm:aff><country xml:lang="fr">Pays-Bas</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Lapalu, Nicolas" sort="Lapalu, Nicolas" uniqKey="Lapalu N" first="Nicolas" last="Lapalu">Nicolas Lapalu</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>INRA-URGI, Route de Saint Cyr</institution>, Versailles Cedex F-78026,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Lawrence, Christopher B" sort="Lawrence, Christopher B" uniqKey="Lawrence C" first="Christopher B." last="Lawrence">Christopher B. Lawrence</name><affiliation wicri:level="1"><nlm:aff id="a10"><institution>Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University</institution>, Blacksburg, Virginia 24061-0477,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="May, Kim" sort="May, Kim" uniqKey="May K" first="Kim" last="May">Kim May</name><affiliation wicri:level="1"><nlm:aff id="a4"><institution>School of Botany, University of Melbourne</institution>, Victoria 3010,<country>Australia</country>.</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Meyer, Michel" sort="Meyer, Michel" uniqKey="Meyer M" first="Michel" last="Meyer">Michel Meyer</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Ollivier, Benedicte" sort="Ollivier, Benedicte" uniqKey="Ollivier B" first="Bénédicte" last="Ollivier">Bénédicte Ollivier</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Poulain, Julie" sort="Poulain, Julie" uniqKey="Poulain J" first="Julie" last="Poulain">Julie Poulain</name><affiliation wicri:level="1"><nlm:aff id="a5"><institution>GENOSCOPE, Centre National de Séquençage, Institut de Génomique CEA/DSV, 2, rue Gaston Crémieux, CP 5706</institution>, Evry Cedex F-91057,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Schoch, Conrad L" sort="Schoch, Conrad L" uniqKey="Schoch C" first="Conrad L." last="Schoch">Conrad L. Schoch</name><affiliation wicri:level="1"><nlm:aff id="a11"><institution>NIH/NLM/NCBI, 45 Center Drive, MSC 6510</institution>, Bethesda, Maryland 20892-6510,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Simon, Adeline" sort="Simon, Adeline" uniqKey="Simon A" first="Adeline" last="Simon">Adeline Simon</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Spatafora, Joseph W" sort="Spatafora, Joseph W" uniqKey="Spatafora J" first="Joseph W." last="Spatafora">Joseph W. Spatafora</name><affiliation wicri:level="1"><nlm:aff id="a6"><institution>Department of Botany and Plant Pathology, Cordley Hall 2082, Oregon State University</institution>, Corvallis, Oregon 97331-2902,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Stachowiak, Anna" sort="Stachowiak, Anna" uniqKey="Stachowiak A" first="Anna" last="Stachowiak">Anna Stachowiak</name><affiliation wicri:level="1"><nlm:aff id="a12"><institution>Institute of Plant Genetics, Polish Academy of Sciences</institution>, Strzeszynska 34, Poznan PL-60479,<country>Poland</country>.</nlm:aff><country xml:lang="fr">Pologne</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Turgeon, B Gillian" sort="Turgeon, B Gillian" uniqKey="Turgeon B" first="B. Gillian" last="Turgeon">B. Gillian Turgeon</name><affiliation wicri:level="1"><nlm:aff id="a13"><institution>Deparment of Plant Pathology & Plant-Microbe Biology, Cornell University</institution>, Ithaca, New York 14853,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Tyler, Brett M" sort="Tyler, Brett M" uniqKey="Tyler B" first="Brett M." last="Tyler">Brett M. Tyler</name><affiliation wicri:level="1"><nlm:aff id="a10"><institution>Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University</institution>, Blacksburg, Virginia 24061-0477,<country>USA</country>.</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Vincent, Delphine" sort="Vincent, Delphine" uniqKey="Vincent D" first="Delphine" last="Vincent">Delphine Vincent</name><affiliation wicri:level="1"><nlm:aff id="a14"><institution>INRA, UMR1202 BIOGECO, 69 Route d'Arcachon</institution>, Cestas F-33612,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Weissenbach, Jean" sort="Weissenbach, Jean" uniqKey="Weissenbach J" first="Jean" last="Weissenbach">Jean Weissenbach</name><affiliation wicri:level="1"><nlm:aff id="a5"><institution>GENOSCOPE, Centre National de Séquençage, Institut de Génomique CEA/DSV, 2, rue Gaston Crémieux, CP 5706</institution>, Evry Cedex F-91057,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Amselem, Joelle" sort="Amselem, Joelle" uniqKey="Amselem J" first="Joëlle" last="Amselem">Joëlle Amselem</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>INRA-URGI, Route de Saint Cyr</institution>, Versailles Cedex F-78026,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Quesneville, Hadi" sort="Quesneville, Hadi" uniqKey="Quesneville H" first="Hadi" last="Quesneville">Hadi Quesneville</name><affiliation wicri:level="1"><nlm:aff id="a3"><institution>INRA-URGI, Route de Saint Cyr</institution>, Versailles Cedex F-78026,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Oliver, Richard P" sort="Oliver, Richard P" uniqKey="Oliver R" first="Richard P." last="Oliver">Richard P. Oliver</name><affiliation wicri:level="1"><nlm:aff id="a15"><institution>Australian Centre for Necrotrophic Fungal Pathogens, Curtin University</institution>, Perth, Western Australia 6845,<country>Australia</country>.</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Wincker, Patrick" sort="Wincker, Patrick" uniqKey="Wincker P" first="Patrick" last="Wincker">Patrick Wincker</name><affiliation wicri:level="1"><nlm:aff id="a5"><institution>GENOSCOPE, Centre National de Séquençage, Institut de Génomique CEA/DSV, 2, rue Gaston Crémieux, CP 5706</institution>, Evry Cedex F-91057,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Balesdent, Marie Helene" sort="Balesdent, Marie Helene" uniqKey="Balesdent M" first="Marie-Hélène" last="Balesdent">Marie-Hélène Balesdent</name><affiliation wicri:level="1"><nlm:aff id="a1"><institution>INRA-Bioger, UR1290, Avenue Lucien Brétignières, BP 01</institution>, Thiverval-Grignon F-78850,<country>France</country>.</nlm:aff><country xml:lang="fr">France</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author><author><name sortKey="Howlett, Barbara J" sort="Howlett, Barbara J" uniqKey="Howlett B" first="Barbara J." last="Howlett">Barbara J. Howlett</name><affiliation wicri:level="1"><nlm:aff id="a4"><institution>School of Botany, University of Melbourne</institution>, Victoria 3010,<country>Australia</country>.</nlm:aff><country xml:lang="fr">Australie</country><wicri:regionArea># see nlm:aff country strict</wicri:regionArea></affiliation></author></analytic><series><title level="j">Nature Communications</title><idno type="eISSN">2041-1723</idno><imprint><date when="2011">2011</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>Fungi are of primary ecological, biotechnological and economic importance. Many fundamental biological processes that are shared by animals and fungi are studied in fungi due to their experimental tractability. Many fungi are pathogens or mutualists and are model systems to analyse effector genes and their mechanisms of diversification. In this study, we report the genome sequence of the phytopathogenic ascomycete <italic>Leptosphaeria maculans</italic> and characterize its repertoire of protein effectors. The <italic>L. maculans</italic> genome has an unusual bipartite structure with alternating distinct guanine and cytosine-equilibrated and adenine and thymine (AT)-rich blocks of homogenous nucleotide composition. The AT-rich blocks comprise one-third of the genome and contain effector genes and families of transposable elements, both of which are affected by repeat-induced point mutation, a fungal-specific genome defence mechanism. This genomic environment for effectors promotes rapid sequence diversification and underpins the evolutionary potential of the fungus to adapt rapidly to novel host-derived constraints.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Skamniotia, P" uniqKey="Skamniotia P">P. Skamniotia</name></author><author><name sortKey="Gurr, S J" uniqKey="Gurr S">S. J. Gurr</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Oliver, R P" uniqKey="Oliver R">R. P. Oliver</name></author><author><name sortKey="Solomon, P S" uniqKey="Solomon P">P. S. Solomon</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rouxel, T" uniqKey="Rouxel T">T. Rouxel</name></author><author><name sortKey="Balesdent, M H" uniqKey="Balesdent M">M. H. Balesdent</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Soanes, D N" uniqKey="Soanes D">D. N. Soanes</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Stergiopoulos, I" uniqKey="Stergiopoulos I">I. Stergiopoulos</name></author><author><name sortKey="De Wit, P J G M" uniqKey="De Wit P">P. J. G. 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Kema</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Australie</li><li>France</li><li>Pays-Bas</li><li>Pologne</li><li>États-Unis</li></country></list><tree><country name="France"><noRegion><name sortKey="Rouxel, Thierry" sort="Rouxel, Thierry" uniqKey="Rouxel T" first="Thierry" last="Rouxel">Thierry Rouxel</name></noRegion><name sortKey="Amselem, Joelle" sort="Amselem, Joelle" uniqKey="Amselem J" first="Joëlle" last="Amselem">Joëlle Amselem</name><name sortKey="Anthouard, Veronique" sort="Anthouard, Veronique" uniqKey="Anthouard V" first="Véronique" last="Anthouard">Véronique Anthouard</name><name sortKey="Balesdent, Marie Helene" sort="Balesdent, Marie Helene" uniqKey="Balesdent M" first="Marie-Hélène" last="Balesdent">Marie-Hélène Balesdent</name><name sortKey="Bally, Pascal" sort="Bally, Pascal" uniqKey="Bally P" first="Pascal" last="Bally">Pascal Bally</name><name sortKey="Bourras, Salim" sort="Bourras, Salim" uniqKey="Bourras S" first="Salim" last="Bourras">Salim Bourras</name><name sortKey="Couloux, Arnaud" sort="Couloux, Arnaud" uniqKey="Couloux A" first="Arnaud" last="Couloux">Arnaud Couloux</name><name sortKey="Degrave, Alexandre" sort="Degrave, Alexandre" uniqKey="Degrave A" first="Alexandre" last="Degrave">Alexandre Degrave</name><name sortKey="Dilmaghani, Azita" sort="Dilmaghani, Azita" uniqKey="Dilmaghani A" first="Azita" last="Dilmaghani">Azita Dilmaghani</name><name sortKey="Dominguez, Victoria" sort="Dominguez, Victoria" uniqKey="Dominguez V" first="Victoria" last="Dominguez">Victoria Dominguez</name><name sortKey="Duret, Laurent" sort="Duret, Laurent" uniqKey="Duret L" first="Laurent" last="Duret">Laurent Duret</name><name sortKey="Fudal, Isabelle" sort="Fudal, Isabelle" uniqKey="Fudal I" first="Isabelle" last="Fudal">Isabelle Fudal</name><name sortKey="Glaser, Nicolas" sort="Glaser, Nicolas" uniqKey="Glaser N" first="Nicolas" last="Glaser">Nicolas Glaser</name><name sortKey="Gout, Lilian" sort="Gout, Lilian" uniqKey="Gout L" first="Lilian" last="Gout">Lilian Gout</name><name sortKey="Grandaubert, Jonathan" sort="Grandaubert, Jonathan" uniqKey="Grandaubert J" first="Jonathan" last="Grandaubert">Jonathan Grandaubert</name><name sortKey="Hoede, Claire" sort="Hoede, Claire" uniqKey="Hoede C" first="Claire" last="Hoede">Claire Hoede</name><name sortKey="Lapalu, Nicolas" sort="Lapalu, Nicolas" uniqKey="Lapalu N" first="Nicolas" last="Lapalu">Nicolas Lapalu</name><name sortKey="Linglin, Juliette" sort="Linglin, Juliette" uniqKey="Linglin J" first="Juliette" last="Linglin">Juliette Linglin</name><name sortKey="Meyer, Michel" sort="Meyer, Michel" uniqKey="Meyer M" first="Michel" last="Meyer">Michel Meyer</name><name sortKey="Ollivier, Benedicte" sort="Ollivier, Benedicte" uniqKey="Ollivier B" first="Bénédicte" last="Ollivier">Bénédicte Ollivier</name><name sortKey="Poulain, Julie" sort="Poulain, Julie" uniqKey="Poulain J" first="Julie" last="Poulain">Julie Poulain</name><name sortKey="Quesneville, Hadi" sort="Quesneville, Hadi" uniqKey="Quesneville H" first="Hadi" last="Quesneville">Hadi Quesneville</name><name sortKey="Simon, Adeline" sort="Simon, Adeline" uniqKey="Simon A" first="Adeline" last="Simon">Adeline Simon</name><name sortKey="Vincent, Delphine" sort="Vincent, Delphine" uniqKey="Vincent D" first="Delphine" last="Vincent">Delphine Vincent</name><name sortKey="Weissenbach, Jean" sort="Weissenbach, Jean" uniqKey="Weissenbach J" first="Jean" last="Weissenbach">Jean Weissenbach</name><name sortKey="Wincker, Patrick" sort="Wincker, Patrick" uniqKey="Wincker P" first="Patrick" last="Wincker">Patrick Wincker</name></country><country name="Australie"><noRegion><name sortKey="Hane, James K" sort="Hane, James K" uniqKey="Hane J" first="James K." last="Hane">James K. Hane</name></noRegion><name sortKey="Cozijnsen, Anton J" sort="Cozijnsen, Anton J" uniqKey="Cozijnsen A" first="Anton J." last="Cozijnsen">Anton J. Cozijnsen</name><name sortKey="Howlett, Barbara J" sort="Howlett, Barbara J" uniqKey="Howlett B" first="Barbara J." last="Howlett">Barbara J. Howlett</name><name sortKey="May, Kim" sort="May, Kim" uniqKey="May K" first="Kim" last="May">Kim May</name><name sortKey="Oliver, Richard P" sort="Oliver, Richard P" uniqKey="Oliver R" first="Richard P." last="Oliver">Richard P. Oliver</name><name sortKey="Van De Wouw, Angela P" sort="Van De Wouw, Angela P" uniqKey="Van De Wouw A" first="Angela P." last="Van De Wouw">Angela P. Van De Wouw</name></country><country name="États-Unis"><noRegion><name sortKey="Ciuffetti, Lynda M" sort="Ciuffetti, Lynda M" uniqKey="Ciuffetti L" first="Lynda M." last="Ciuffetti">Lynda M. Ciuffetti</name></noRegion><name sortKey="Goodwin, Stephen B" sort="Goodwin, Stephen B" uniqKey="Goodwin S" first="Stephen B." last="Goodwin">Stephen B. Goodwin</name><name sortKey="Lawrence, Christopher B" sort="Lawrence, Christopher B" uniqKey="Lawrence C" first="Christopher B." last="Lawrence">Christopher B. Lawrence</name><name sortKey="Schoch, Conrad L" sort="Schoch, Conrad L" uniqKey="Schoch C" first="Conrad L." last="Schoch">Conrad L. Schoch</name><name sortKey="Spatafora, Joseph W" sort="Spatafora, Joseph W" uniqKey="Spatafora J" first="Joseph W." last="Spatafora">Joseph W. Spatafora</name><name sortKey="Turgeon, B Gillian" sort="Turgeon, B Gillian" uniqKey="Turgeon B" first="B. Gillian" last="Turgeon">B. Gillian Turgeon</name><name sortKey="Tyler, Brett M" sort="Tyler, Brett M" uniqKey="Tyler B" first="Brett M." last="Tyler">Brett M. Tyler</name></country><country name="Pays-Bas"><noRegion><name sortKey="Kema, Gert H J" sort="Kema, Gert H J" uniqKey="Kema G" first="Gert H. J." last="Kema">Gert H. J. Kema</name></noRegion></country><country name="Pologne"><noRegion><name sortKey="Stachowiak, Anna" sort="Stachowiak, Anna" uniqKey="Stachowiak A" first="Anna" last="Stachowiak">Anna Stachowiak</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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